Codex
Morpho Typer
About
Cell Type (Human)
Any
AND
Cell Type (Machine)
Any
A1
A17
A2
Bowtie deep in IPL
Bursty suppressed by contrast
EW25
EW5to
EW85
F-mini-OFF
F-mini-ON
GluMI
H13
H14
H15
H18
H19
H20
H21
H22
H23
HD1
HD2
Local edge detector
M1
M2
M6
Medium-field deep in IPL sustained
Medium-field deep in IPL transient
Medium-field dorsal pointing low in IPL
Medium-field low in IPL sustained
Medium-field low in IPL transient
Medium-field Mid-IPL smooth
Medium-field Mid-IPL varicose
Midnight
NBC
nNOS-2
OFF medium sustained
OFF SAC
OFF sustained alpha
OFF sustained EW1no
OFF sustained EW3o
OFF transient alpha
OFF transient medium RF
OFF transient small RF
OFF vertical OS - asymmetric
ON alpha
ON bursty
ON delayed
ON DS sustained
ON SAC
ON transient EW6t
ON transient medium RF
ON transient small RF
ON-OFF - subtype unknown
ON-OFF DS
Other
PixON
RBC
Separate dendrites and axons
Sustained suppressed-by-contrast no surround EW27
Sustained suppressed-by-contrast strong surround EW28
t1
t2
t3a
t3b
t4
t5i
t5o
t5t
t6
t7
t8
t9
UHD
Wide-field mid IPL
Wide-field ON non-spiny dense
Wide-field ON non-spiny sparse
Wide-field ON spiny spikelets
XBC
AND
Other Type
Any
1ni or 1no
1no
25
27 or 28
2aw - symmetric
2i or 2o
2o or 2i?
3i or 3o?
3o
3o?
5to
6t
A bit too sparse?
A bit weird, maybe OFF OS?
A little cut off
A1
A17
A1; nNOS1?
A2
AC - SAD
AC inner ON MF asymmetric
AC MF inner ON (DB)
AC WF oriented
astrocyte
BC
BC OFF
BGbx2-like but bigger; mid interChAT
bistrat
bistrat clipped
bistrat ON and OFF
bistrat; OFF
Both peaks in mid-IPL? Maybe a 5to but a weird one
bowtie
Bowtie deep in IPL
broad OFF
Cell looks dying, exclude from classifyier
Changed to Ew28 - Julia
coul be H13
Could also be a SAD?
Could also be M6 without the OFF layer?
Could also be nNOS-3
Could also be WF on Spiny sparse
Crh-1
CRH-1
CRH-1 or H45
CRH-2
DAC
dAC A1-like
dAC MF
dAC MFAC
dAC mid-IPL varicose
dAC nNOS-2 or WF mid-IPL
dAC SAD
dAC SAD?
dAC WF mid IPL
dAC WFAC
dAC, separate axons and dendrites (SAD)
Displaced
Displaced 82?
displaced RGC
Do not use
Does it stratify a bit too deep?
Does not look 'angled' enough for F-mini
Dorsal-pointing low in IPL
dWF ON
dWF ON with antenna to OFF
Either Sbc or 82
EW type 25
EW25
EW815
EW8n
EW915
F-mini OFF
F-mini OFF? Weird extra neurite
F-mini ON
F-mini ON - Looks more like HD1
F-mini-ON
Gbx2
Gbx2 (DB)
gbx2 s5 (CRH2)
GDL3
GluMI
H13
H14
h14
H15
H16
H18
H19
H20
H21
H22
H23
H23 - t5o CHIMERA
H23 = MAC
H23?
H36
H42
H45
H47
H48
H53
HD
HD cell, I think
HD maybe - need to see SACs
HD1
HD2
heavy interChAT
Incomplete
Incomplete, do no use
Incomplete, do not use
Incomplete, hard to tell
Incomplete, ignore
Incomplete, leave out
Incomplete. Hard to tell
inner ON
inner ON polyaxonal
inner ON WF asymmetric
inner ON; asymmetric
interChAT
interplexiform
Is is too dense?
Is the deep peak too small?
Is there enough of mid-IPL peak
JamB
Lacks peak in deep, but too dense for M6?
LED with appendage
Local edge detector
Looks angled?
Looks too dense for M1
Low in IPL but tiny
M1
M4
M6
M6-ish
M6? weak bistrat
Maybe?
med large fld tufty spiny OFF
MF
MF inner ON
MF inner ON disordered
MF inner ON wavy
MF inner ON; branchy disordered
MF low sus? not sure
MF mid IPL
MF mid IPL oriented
MF OFF
MF OFF bistrat
MF ON bistrat
MF ON recip
MF ON-OFF
MF polyax
MF tristrat
MF13
MFAC
MFAC - CRH-2
MFAC - SAD
MFAC branchy
MFAC CRH-2 (GBX2 - S5)
MFAC low in IPL
MFAC mid-IPL
MFAC multistrat ON + OFF
microglia
microglial
Microglial (activated?)
Mirror of F-mini?
monostr interChAT MF asymmetric
Mostly OFF
Mueller
Muller
Muller clump
Muller cluster
Muller pair
Mullers
NBC
NBC?
necrotic?
NF mid IPL
NF OFF
NF OFF bistrat
NF ON
NF ON-OFF
NFAC
NFAC multistrat
NFAC / t5i chimera
NFAC larger bistrat H18?
NFAC OFF
NFAC ON
NFAC ON + OFF
NFAC ON+OFF
nNOS-2
nNOS-2 AC
nNOS1
nNOS1; CRH-2
No idea -Julia
No idea, weird! 5to?
Not enought in OFF?
not sure
Not sure
Not sure - Julia
Not sure, looks a bit puffy
Not sure, looks incomplete
OFF
OFF - will check which
OFF 1ni or 1no?
OFF B-K WAC
Off BKW
OFF branchy
OFF clipped
OFF deep
OFF distal to OFF ChAT
OFF hitch
OFF hitch - Could it be Ew3o?
OFF hitch(DB)
OFF interChAT
OFF SAC
OFF sparse
OFF sparse?
OFF sus alpha
OFF sus EW1no
OFF tr MeRF
OFF tr. ?
OFF tr. alpha
OFF tr. alpha?
OFF tr. MeRF
OFF tr. SmRF
OFF trans alpha
OFF vOS (JamB)
OFF vOS (JAMB)
OFFvOS JAMB
OIB
OIB (ON interChAT boxy)
OMTA
OMTA - marked as HD1 as mid-ipl
OMTA OFF mini trans alpha
OMTA Off mini trans alpha
ON alpha
ON alpha = M4
ON alpha or PixON
ON B-K WAC
ON BC
On BKW
ON Bursty?
ON delayed
ON delayed RGC
ON DS
ON DS sus
ON DS sus?
ON OS
ON SAC
ON spiny
ON spiny WFAC
ON tr. I think
ON tr. MeRF
On tr. MeRF
ON tr. of some kind
ON tr. of some kind or HD
On tr. SmRF
ON tr. SmRF
ON transient MeRF
ON-D
ON-D?
ON-delayed
ON-DS
ON-OFF
ON-OFF DS
ON-SAC
ONSAC
ONvOS SmRF
OODS
OODS - V - HB9
OODS Hb9
OODS V (HB9)
OODS V (Hb9)
Or Ew3o
OR Ew3o?
Or EW6t?
or nNOS-2?
Or OFF medium sustained
Or sus
Or sustained
OS RGC? Extremely oriented
outer OFF
outer OFF branchy
outer OFF branchy (DB)
outer OFF MF INL soma
Overlaps mid-IPL too much?
Peaks look too equal for ON-OFF DS
Pericyte
Piece missing, exclude from classifyier
Pix-ON
PIx-ON; M5
PixON
Probably cut off?
Puffy F-mini OFF
Putative 72
Putative 82
RAC2
RAC2 bistrat VIP
RAC2 monostr
RAC2-ish monostrat
radiate, broad interChAT
RB
RBC
RGC
S2
SAC
SAD
SAD?
SBC
SBC brackets ChAT
SbC EW27
SF INLsoma
SF AC
SF other
sloppy ON ChAT
sOFF alpha
sOFF alpha?
sOFF branchy
sON alpha
sON alpha; M4
sSBC EW27 or 28
t1
t1a
t2
t2?
t3
t3?
t3a
t3b
t4
t4?
t5i
t5o
t5oi
t5t
t5t - H23 chimera?
t6
t7
t8
t9
t9 bistrat
t9o? NBC?
TH2
The kind that's a bit less angled
tOFF alpha
tON alpha
Too big for EW25, could it be OFF OS or 1ni
Too cut off, do not use
Too sparse for UHD? not sure
tristrat
type TBD
UHD
UHD - only mid IPL? HD1?
updated segID and link are not the same cell
Very small
VGluT3
VIP-RAC2 bistrat INL soma
VIPm
VIPm-RAC2
VIPm-RAC2 bistrat
VIPm-RAC2?
VIPm=RAC2
Weird
Weird bump in stratification. Keep an eye out for more of these
WF (5) - weird bumps, subtype?
WF (6)
WF axon outer OFF
WF bistrat inner ON + mid IP
WF inner ON
WF inner ON varicose
WF inner ON wavy
WF mid interChAT
WF mid IPL
WF OFF
WF OFF asymmetric MF
WF OFF bistrat
WF OFF/ mid IPL
WF ON
WF ON INL soma
WF ON recip
WF ON spiny polyax; shares ribbons with ON alpha
WF ON-OFF
WF outer OFF
WF outer OFF bifid
WF outer OFF polyax
WF polyax
WF polyax ON
WF polyaxonal t7 level
WF S1 not DAC
WF S1 polyax rebipr at t6 en passant; but not a DAC. t2 input; nNOS1 output
WF S1 polyax t2 input; not DAC
WF sparse outer OFF
WF(3)
WF(5)
WF(6)
WF(6)? inner ON
WF(7)
WFAC
WFAC - middle or deep?
WFAC - non-spiny dense
WFAC - sparse
WFAC / WF ON
WFAC A1-like
WFAC bistrat outer OFF + ON interChAT
WFAC oriented ON/OFF border
WFAC SAD
WFAC spiny
WFAC ~t5 level
XBC
AND
Cell Class
Any
RGC
AC
BC
HC
Glia
AND
Status
Any
611 Assigned
Complete
Complete (cut off)
WIP
Wrong Type
Wrong type
AND
Reliability Human Label
Any
High
Low
Medium
AND
Machine soma location
Any
GCL
INL
Segment IDs
Segment IDs Fetched
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